WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00022837 Phenotype Remark  >95% embryonic lethality
Secondary Identifier  [cgc5603]:Y71F9AL.16

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

6 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000199 arx-1 Y71F9AL.16 Caenorhabditis elegans
WBGene00022111 Y71F9AL.6 Y71F9AL.6 Caenorhabditis elegans
WBGene00304792 Y71F9AL.25 Y71F9AL.25 Caenorhabditis elegans
WBGene00022112 Y71F9AL.7 Y71F9AL.7 Caenorhabditis elegans
WBGene00219219 mir-5546 Y71F9AL.22 Caenorhabditis elegans
WBGene00220195 Y71F9AL.24 Y71F9AL.24 Caenorhabditis elegans

4 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y71F9AL.16 Y71F9AL.16 1278   I: 2883864-2883959
CDS:Y71F9AL.25 Y71F9AL.25 456   I: 2888900-2889355
CDS:Y71F9AL.6 Y71F9AL.6 816   I: 2890446-2891261
CDS:Y71F9AL.7 Y71F9AL.7 555   I: 2887800-2888354

1 Laboratories

Primary Identifier
EU

1 Phenotype

Identifier Name Description
WBPhenotype:0000050 embryonic lethal Animals die during embryonic development. In C. elegans, often assayed as refractile eggs that fail to hatch; when applied to large-scale RNAi screens in C. elegans, more than 10% of embryos die.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00005603

0 Strain