WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00007532 Phenotype Remark  % penetrance
Remark  PCR product used to make dsRNA was amplified from genomic DNA. Secondary Identifier  PF:GL1_6A9

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

2 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010785 top-2 K12D12.1 Caenorhabditis elegans
WBGene00022854 cin-4 ZK1127.7 Caenorhabditis elegans

2 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK1127.7 ZK1127.7 2529   II: 7038472-7038585
CDS:K12D12.1 K12D12.1 4563   II: 11875157-11875256

1 Laboratories

Primary Identifier
KK

15 Phenotype

Identifier Name Description
WBPhenotype:0000050 embryonic lethal Animals die during embryonic development. In C. elegans, often assayed as refractile eggs that fail to hatch; when applied to large-scale RNAi screens in C. elegans, more than 10% of embryos die.
WBPhenotype:0001106 spindle orientation variant AB or P1 early emb The orientation of the spindle is aberrant in either the AB or the P1 cell.
WBPhenotype:0001155 pronuclei meet centrally early emb The maternal and paternal pronuclei meet more centrally instead of meeting in the posterior end of the embryo.
WBPhenotype:0001165 excess maternal pronucleus early emb One-cell embryos have two or more maternal pronuclei.
WBPhenotype:0001139 nuclear envelope assembly variant early emb Nuclear envelope does not reassemble properly.
WBPhenotype:0001121 exaggerated asynchrony early emb Asynchrony of the second division is exaggerated and P1 divides more slowly than normal.
WBPhenotype:0001163 pronucleus formation failure early emb Either the maternal or paternal pronucleus is absent.
WBPhenotype:0001119 cell cycle slow early emb Embryos take longer to divide during the first and second cell divisions.
WBPhenotype:0001143 multiple nuclei early emb Embryos contain more than one nucleus per cell in the inviable one- to four-cell embryo.
WBPhenotype:0002501 ectopic cleavage furrow early emb One or more cells of the early embryo (one-cell stage to four-cell stage) exhibit one or more cleavage furrows in locations not normally found in control cells.
WBPhenotype:0001156 pronuclear size defective early emb Maternal or paternal pronucleus is either too small or too large.
WBPhenotype:0001141 nucleus reforms cell division remnant early emb After division of either one-cell or two-cell embryos, the nuclei reappear next to the cell division remnant.
WBPhenotype:0001080 excessive blebbing early emb Excessive shaking and movements are seen in the cell membrane or cytoplasm of one-cell or two-cell embryos.
WBPhenotype:0001161 maternal pronucleus indistinct early emb Maternal pronucleus has a blurry appearance. The nuclear envelope does not have a crisp circular shape.
WBPhenotype:0001126 cell cell contacts abnormal in four cell embryo Aba, ABp, EMS, or P1 contacts fewer of its sister cells than in control embryos.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00005599

1 Strain

WormBase ID
WBStrain00000001