WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00008050 Phenotype Remark  Observed in >=10% of progeny.
Remark  PCR product used to make dsRNA was amplified from genomic DNA. Secondary Identifier  PF:GL1_6E2

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006386 taf-5 F30F8.8 Caenorhabditis elegans

1 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F30F8.8 F30F8.8 1947   I: 7849825-7850057

1 Laboratories

Primary Identifier
KK

11 Phenotype

Identifier Name Description
WBPhenotype:0000050 embryonic lethal Animals die during embryonic development. In C. elegans, often assayed as refractile eggs that fail to hatch; when applied to large-scale RNAi screens in C. elegans, more than 10% of embryos die.
WBPhenotype:0000032 sick Animals exhibit some combination of abnormal features relating to size, movement, body integrity, pigmentation, viability, fertility etc.
WBPhenotype:0001105 P0 spindle position abnormal Altered P0 spindle placement causes either a symmetric first division, a division in which P1 is larger than AB, or a division in which the asymmetry is exaggerated such that AB is much larger than normal.
WBPhenotype:0001082 large cytoplasmic granules early emb Abnormally large granules are observed in the cytoplasm of P0.
WBPhenotype:0001169 pseudocleavage exaggerated early emb Embryos have more pronounced pseudocleavage than normal.
WBPhenotype:0001143 multiple nuclei early emb Embryos contain more than one nucleus per cell in the inviable one- to four-cell embryo.
WBPhenotype:0001130 cytokinesis fails early emb Cells of the embryo attempt to divide but fail to form two daughter cells.
WBPhenotype:0001123 synchronous second division early emb AB and P1 divide synchronously.
WBPhenotype:0001080 excessive blebbing early emb Excessive shaking and movements are seen in the cell membrane or cytoplasm of one-cell or two-cell embryos.
WBPhenotype:0001147 polar body defective early emb Polar bodies are abnormal in the inviable one- to four-cell embryo.
WBPhenotype:0001131 loose mitotic furrow early emb Once formed, the mitotic furrow can "slide"laterally.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00005599

1 Strain

WormBase ID
WBStrain00000001