WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00026588 Genotype  NL4256 rrf-3(pk1426)
Phenotype Remark  %lethal range Secondary Identifier  Simmer:Y111B2D.b

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004161 pqn-80 Y111B2A.14 Caenorhabditis elegans

15 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y111B2A.14a Y111B2A.14a 4251   III: 12626575-12626718
CDS:Y111B2A.14b Y111B2A.14b 4341   III: 12626575-12626718
CDS:Y111B2A.14f Y111B2A.14f 3681   III: 12628947-12629306
CDS:Y111B2A.14g Y111B2A.14g 3762   III: 12628947-12629306
CDS:Y111B2A.14h Y111B2A.14h 3672   III: 12628947-12629306
CDS:Y111B2A.14k Y111B2A.14k 3192   III: 12630583-12630678
CDS:Y111B2A.14m Y111B2A.14m 1773   III: 12641850-12642314
CDS:Y111B2A.14o Y111B2A.14o 1164   III: 12644525-12644596
CDS:Y111B2A.14c Y111B2A.14c 4350   III: 12626575-12626718
CDS:Y111B2A.14d Y111B2A.14d 4260   III: 12626575-12626718
CDS:Y111B2A.14e Y111B2A.14e 3771   III: 12628947-12629306
CDS:Y111B2A.14i Y111B2A.14i 3201   III: 12630583-12630678
CDS:Y111B2A.14j Y111B2A.14j 3111   III: 12630583-12630678
CDS:Y111B2A.14l Y111B2A.14l 3102   III: 12630583-12630678
CDS:Y111B2A.14n Y111B2A.14n 1683   III: 12641850-12642314

1 Laboratories

Primary Identifier
NL

1 Phenotype

Identifier Name Description
WBPhenotype:0000050 embryonic lethal Animals die during embryonic development. In C. elegans, often assayed as refractile eggs that fail to hatch; when applied to large-scale RNAi screens in C. elegans, more than 10% of embryos die.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00006395

0 Strain