WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00082826 Remark  Exact sequence used for RNAi not stated by authors, genomic sequence of gene used for curation.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

2 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005020 sqv-2 Y110A2AL.14 Caenorhabditis elegans
WBGene00006710 ubc-15 Y110A2AR.2 Caenorhabditis elegans

6 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y110A2AL.14 Y110A2AL.14 993   II: 2889222-2889303
CDS:Y110A2AR.2b Y110A2AR.2b 687   II: 2902522-2902539
CDS:Y110A2AR.2a Y110A2AR.2a 657   II: 2906542-2906721
CDS:Y110A2AR.2d Y110A2AR.2d 1623   II: 2902522-2902539
CDS:Y110A2AR.2e Y110A2AR.2e 720   II: 2901790-2901840
CDS:Y110A2AR.2f Y110A2AR.2f 1656   II: 2901790-2901840

0 Laboratories

0 Phenotype

1 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000050 embryonic lethal Animals die during embryonic development. In C. elegans, often assayed as refractile eggs that fail to hatch; when applied to large-scale RNAi screens in C. elegans, more than 10% of embryos die.

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00005337

0 Strain