WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00086354 Genotype  rrf-3(pk1426)

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004946 sop-3 Y71F9B.10 Caenorhabditis elegans

4 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y71F9B.10a Y71F9B.10a 4428   I: 2761318-2761513
CDS:Y71F9B.10b Y71F9B.10b 4134   I: 2761318-2761513
CDS:Y71F9B.10c Y71F9B.10c 4446   I: 2761318-2761513
CDS:Y71F9B.10g Y71F9B.10g 4152   I: 2761318-2761513

0 Laboratories

1 Phenotype

Identifier Name Description
WBPhenotype:0000154 reduced brood size The characteristic number of offspring produced is lower compared to that of control animals.

1 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000050 embryonic lethal Animals die during embryonic development. In C. elegans, often assayed as refractile eggs that fail to hatch; when applied to large-scale RNAi screens in C. elegans, more than 10% of embryos die.

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00028381

0 Strain