WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00114186 Remark  (Table S2) hmg-3 RNAi

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001973 hmg-3 C32F10.5 Caenorhabditis elegans

1 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C32F10.5 C32F10.5 2070   I: 5815759-5816010

0 Laboratories

0 Phenotype

10 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000050 embryonic lethal Animals die during embryonic development. In C. elegans, often assayed as refractile eggs that fail to hatch; when applied to large-scale RNAi screens in C. elegans, more than 10% of embryos die.
WBPhenotype:0001908 ventral closure defective The animal displays defects in any step of the ventral enclosure process resulting an embryo that is not enclosed and or with interior cells protruding out of the embryo.
WBPhenotype:0001028 nuclear appearance variant The morphological appearance of nuclei differs from control animals.
WBPhenotype:0000366 three fold arrest Cessation of development that normally occurs in C. elegans 520-620min after the first cleavage at 20C, the stage between the 2-fold and fully elongated embryo.
WBPhenotype:0000037 egg morphology variant Any variation in the overall structure or appearance of fertilized oocytes that are laid compared to those laid by control animals.
WBPhenotype:0000361 lima bean arrest Cessation of development at an intermediate stage in embryogenesis, immediately following the completion of gastrulation. In C. elegans this occurs around 350-390 minutes after first cleavage, cell number is at approximately 560 cells. At this time cell proliferation ceases and the embryo begins morphogenesis and elongation. The shape of the entire embryo within the eggshell resembles a lima bean (Wormatlas).
WBPhenotype:0008001 embryonic cell fate specification variant Any variation in the processes that govern acquisition of particular cell fates in the embryo, from the time of zygote formation until hatching compared to control.
WBPhenotype:0000367 comma arrest emb Cessation of development during the middle stage in embryogenesis of the worm in which the embryo is slightly folded within the eggshell (Wormatlas).
WBPhenotype:0002570 embryonic arrest during gastrulation Cessation of development during the gastrulation stage of embryonic development. In C. elegans, gastrulation occurs 100-290 minutes after first cleavage at 20 degrees Centigrade when the embryo develops from 28 cells to 421 cells (during the proliferating embryo life stage).
WBPhenotype:0002571 anterior enclosure defective Embryos exhibit a failure to enclose the anterior embryo region with hypodermis during the comma to early elongation stage of embryonic development.

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00056424

1 Strain

WormBase ID
WBStrain00047121