WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00062233 Remark  Phenotypic class NELD

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

2 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018006 gpaa-1 F33D11.9 Caenorhabditis elegans
WBGene00018009 dhhc-3 F33D11.12 Caenorhabditis elegans

11 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F33D11.9j F33D11.9j 300   I: 5857740-5858039
CDS:F33D11.9c F33D11.9c 1872   I: 5857740-5858124
CDS:F33D11.9h F33D11.9h 504   I: 5857740-5858124
CDS:F33D11.9e F33D11.9e 1824   I: 5857740-5858124
CDS:F33D11.9b F33D11.9b 2031   I: 5857740-5858124
CDS:F33D11.9a F33D11.9a 849   I: 5857740-5858124
CDS:F33D11.9d F33D11.9d 1983   I: 5857740-5858124
CDS:F33D11.9f F33D11.9f 690   I: 5857740-5858124
CDS:F33D11.9g F33D11.9g 663   I: 5857740-5858124
CDS:F33D11.9i F33D11.9i 519   I: 5857740-5858124
CDS:F33D11.12 F33D11.12 783   I: 5863030-5863180

1 Laboratories

Primary Identifier
PF

0 Phenotype

1 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000050 embryonic lethal Animals die during embryonic development. In C. elegans, often assayed as refractile eggs that fail to hatch; when applied to large-scale RNAi screens in C. elegans, more than 10% of embryos die.

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00024925

1 Strain

WormBase ID
WBStrain00000001