WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00114825 Remark  Exact sequence used for RNAi not stated by authors, spliced coding region sequence of gene used for curation. Authors did state they used the following clones to create transcribe dsRNAs for this experiment: yk172f4, yk133h4

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006771 tln-1 Y71G12B.11 Caenorhabditis elegans

7 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y71G12B.11a Y71G12B.11a 7662   I: 1721597-1721729
CDS:Y71G12B.11b Y71G12B.11b 2991   I: 1721597-1721729
CDS:Y71G12B.11e Y71G12B.11e 6567   I: 1726686-1727126
CDS:Y71G12B.11g Y71G12B.11g 177   I: 1740096-1740272
CDS:Y71G12B.11c Y71G12B.11c 5673   I: 1729895-1730055
CDS:Y71G12B.11d Y71G12B.11d 4536   I: 1734592-1738527
CDS:Y71G12B.11f Y71G12B.11f 1896   I: 1726686-1727126

0 Laboratories

1 Phenotype

Identifier Name Description
WBPhenotype:0000053 paralyzed arrested elongation two fold Movement and elongation ceases at the two-fold stage. The myofilament lattice in body wall muscle cells is variant. However, development in embryos continues. Embryos hatch as inviable larvae.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00024261

0 Strain