WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

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RNAi :

WormBase ID  WBRNAi00059910 Phenotype Remark  The precocious alae secretion phenotype that is observed in lin-41(ma104) lf mutants is modestly, but reproducibly, enhanced on lin-42(RNAi).

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018572 lin-42 F47F6.1 Caenorhabditis elegans

5 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F47F6.1e F47F6.1e 1011   II: 1234175-1234429
CDS:F47F6.1d F47F6.1d 1965   II: 1234175-1234429
CDS:F47F6.1a F47F6.1a 894   II: 1234175-1234429
CDS:F47F6.1b F47F6.1b 1794   II: 1234175-1234429
CDS:F47F6.1g F47F6.1g 297   II: 1234175-1234429

1 Laboratories

Primary Identifier
CT

1 Phenotype

Identifier Name Description
WBPhenotype:0000168 alae secretion variant Variations in the regulated release of proteins needed for alae formation by epidermal seam cells compared to control. Alae are small linear ridges running along the lateral lines of the cuticle, lengthwise along the body (WormAtlas).

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00024931

1 Strain

WormBase ID
WBStrain00005178