WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00099987 Genotype  rrf-3(pk1426); him-8(e1489)
Remark  (Table S2) ajm-1 RNAi. Exact sequence used for RNAi not stated by authors, Ahringer laboratory clone used for curation.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000100 ajm-1 C25A11.4 Caenorhabditis elegans

13 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C25A11.4d C25A11.4d 5595   X: 9082983-9083084
CDS:C25A11.4b C25A11.4b 3882   X: 9082983-9083084
CDS:C25A11.4f C25A11.4f 5718   X: 9082983-9083084
CDS:C25A11.4l C25A11.4l 4710   X: 9094746-9094808
CDS:C25A11.4g C25A11.4g 4464   X: 9097447-9097454
CDS:C25A11.4a C25A11.4a 4443   X: 9098346-9098640
CDS:C25A11.4h C25A11.4h 4140   X: 9100259-9100369
CDS:C25A11.4j C25A11.4j 3831   X: 9104692-9104736
CDS:C25A11.4c C25A11.4c 4722   X: 9082983-9083084
CDS:C25A11.4e C25A11.4e 3534   X: 9105515-9106296
CDS:C25A11.4i C25A11.4i 3903   X: 9103762-9103809
CDS:C25A11.4k C25A11.4k 4935   X: 9092285-9092572
CDS:C25A11.4m C25A11.4m 4578   X: 9095145-9095146

1 Laboratories

Primary Identifier
DZ

0 Phenotype

1 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000188 gonad arm morphology variant Any variation in the 'arm-like' form, structure or composition of the specialized tissue of the reproductive tract that produces gametes compared to control. In C. elegans the reproductive tract in the hermaphrodite has two equivalent gonad 'arms', while the male has a one-armed gonad.

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00036019

0 Strain