WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00100131 Genotype  rrf-3(pk1426); him-8(e1489)
Remark  (Table S2) Y53F4B.13 RNAi. Exact sequence used for RNAi not stated by authors, Ahringer laboratory clone used for curation.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013160 cmtr-1 Y53F4B.13 Caenorhabditis elegans

4 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y53F4B.13a Y53F4B.13a 2757   II: 15026196-15026204
CDS:Y53F4B.13c Y53F4B.13c 1848   II: 15026196-15026204
CDS:Y53F4B.13b Y53F4B.13b 2694   II: 15026196-15026204
CDS:Y53F4B.13d Y53F4B.13d 1785   II: 15026196-15026204

1 Laboratories

Primary Identifier
DZ

0 Phenotype

1 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000188 gonad arm morphology variant Any variation in the 'arm-like' form, structure or composition of the specialized tissue of the reproductive tract that produces gametes compared to control. In C. elegans the reproductive tract in the hermaphrodite has two equivalent gonad 'arms', while the male has a one-armed gonad.

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00036019

0 Strain