WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00098100 Phenotype Remark  RNAi of ubc-12 resulted in increased germ cell apoptosis and an accumulation of germ cell corpses in response to the DNA-alkylating agent N-ethyl-N-nitrosourea (ENU).
Remark  (Figure 1d) ubc-12 RNAi. Exact sequence used for RNAi not stated by authors, Ahringer laboratory clone used for curation.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006707 ubc-12 R09B3.4 Caenorhabditis elegans

1 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R09B3.4 R09B3.4 543   I: 11911327-11911420

1 Laboratories

Primary Identifier
WD

3 Phenotype

Identifier Name Description
WBPhenotype:0000183 apoptosis increased Any perturbation that causes an elevation in the frequency of cell death by apoptosis compared to control animals.
WBPhenotype:0001180 accumulated germline cell corpses Animals exhibit an increase in the quantity of germ line cells that have undergone programmed cell death but have not been engulfed.
WBPhenotype:0001918 chemical hypersensitive Animals respond to a specific chemical at a lower concentration or a shorter exposure compared to control animals.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00031605

1 Strain

WormBase ID
WBStrain00000001