WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00097654 Genotype  clk-2(mn159)
Phenotype Remark  gck-1 RNAi resulted in increased apoptosis of germ cells, as determined by Syto12 staining, compared to controls Remark  (Figure 7) gck-1 RNAi

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001526 gck-1 T19A5.2 Caenorhabditis elegans

8 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T19A5.2f T19A5.2f 1959   V: 8947811-8947888
CDS:T19A5.2b T19A5.2b 2412   V: 8948708-8949235
CDS:T19A5.2c T19A5.2c 2409   V: 8948708-8949235
CDS:T19A5.2g T19A5.2g 1914   V: 8949658-8949690
CDS:T19A5.2a T19A5.2a 1962   V: 8947811-8947888
CDS:T19A5.2d T19A5.2d 1917   V: 8949658-8949690
CDS:T19A5.2e T19A5.2e 1902   V: 8951431-8951448
CDS:T19A5.2h T19A5.2h 1899   V: 8951431-8951448

1 Laboratories

Primary Identifier
JS

1 Phenotype

Identifier Name Description
WBPhenotype:0000183 apoptosis increased Any perturbation that causes an elevation in the frequency of cell death by apoptosis compared to control animals.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00035301

0 Strain