WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00084617 Genotype  haf-1(tm843)
Phenotype Remark  The haf-1(tm843) mutation suppressed the unfolded protein response induced by hsp-60 RNAi, as indicated by reduced levels of hsp-6 mRNA

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002025 hsp-60 Y22D7AL.5 Caenorhabditis elegans

3 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y22D7AL.5c Y22D7AL.5c 789   III: 1623128-1623436
CDS:Y22D7AL.5a Y22D7AL.5a 1707   III: 1619759-1619905
CDS:Y22D7AL.5b Y22D7AL.5b 1149   III: 1619759-1619905

1 Laboratories

Primary Identifier
SJ

2 Phenotype

Identifier Name Description
WBPhenotype:0000137 mRNA levels reduced Animals exhibit decreased levels of messenger RNA compared to control.
WBPhenotype:0001719 unfolded protein response variant Animals exhibit variations in any of the series of molecular signals generated as a consequence of the presence of unfolded proteins in the endoplasmic reticulum (ER) and or the mitochondria, compared to control. One such response is the increase in expression of chaperones.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00035985

0 Strain