WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00110579 Genotype  HRG-3-mCherry
Remark  Exact sequence used for RNAi not stated by authors, Ahringer laboratory clone used for curation. Authors used HRG-3-mCherry to identify components that regulate HRG-3 secretion from the intestine.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000894 dab-1 M110.5 Caenorhabditis elegans

8 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M110.5b M110.5b 1479   II: 8226330-8226438
CDS:M110.5d M110.5d 1479   II: 8226330-8226438
CDS:M110.5c M110.5c 1425   II: 8226841-8226901
CDS:M110.5g M110.5g 1437   II: 8226841-8226901
CDS:M110.5a M110.5a 1473   II: 8226330-8226438
CDS:M110.5e M110.5e 1485   II: 8226330-8226438
CDS:M110.5f M110.5f 1431   II: 8226841-8226901
CDS:M110.5h M110.5h 1431   II: 8226841-8226901

0 Laboratories

0 Phenotype

2 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000112 protein expression variant Variations in the biogenesis and stability of protein molecules compared to control.
WBPhenotype:0001864 protein transport variant Any variation in the processes that modulate the frequency, rate or extent of the directed movement of a protein into, out of, within or between cells by means of some external agent such as a transporter or pore compared to control.

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00038456

0 Strain