WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00106258 Genotype  Phsp16-2::prkl-1
Phenotype Remark  prkl-1 RNAi induction at the mid-L4 stage, after VC4 and VC5 neurons had undergone normal polarizationand begun laterally-directed neurite extension along the vulva, resulted in the emergence of new A/P-directed neuritis. These findings strongly support the notion that active PCP-like signaling or at least PRKL-1 activity is required persistently during development to maintain neuronal polarity. Remark  Temporal control of prkl-1 knock-down was achieved using an extrachromosomal transgene bearing sense and anti-sense prkl-1 sequences under the control of the hsp16-2 heat shock-inducible promoter (Phsp16-2::prkl-1).

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022727 prkl-1 ZK381.5 Caenorhabditis elegans

2 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK381.5b ZK381.5b 1230   IV: 6979028-6979141
CDS:ZK381.5a ZK381.5a 1572   IV: 6979028-6979141

0 Laboratories

1 Phenotype

Identifier Name Description
WBPhenotype:0000104 cell polarity variant Contents or structures of a cell are no longer restricted/localized to their typical positions within the cell.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00040178

0 Strain