WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00110428 Phenotype Remark  Certain seam cells fail to terminally differentiate, resulting in gaps in the alae.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004751 sea-2 K10G6.3 Caenorhabditis elegans

16 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K10G6.3h K10G6.3h 5043   II: 3950377-3950396
CDS:K10G6.3i K10G6.3i 5472   II: 3950377-3950396
CDS:K10G6.3g K10G6.3g 5907   II: 3950377-3950396
CDS:K10G6.3c K10G6.3c 5190   II: 3962223-3962344
CDS:K10G6.3n K10G6.3n 5379   II: 3962522-3962853
CDS:K10G6.3m K10G6.3m 4029   II: 3964340-3965280
CDS:K10G6.3r K10G6.3r 4893   II: 3964340-3965280
CDS:K10G6.3a K10G6.3a 5619   II: 3962223-3962344
CDS:K10G6.3b K10G6.3b 5166   II: 3962223-3962344
CDS:K10G6.3d K10G6.3d 4464   II: 3964340-3965280
CDS:K10G6.3f K10G6.3f 5478   II: 3950377-3950396
CDS:K10G6.3j K10G6.3j 4755   II: 3962223-3962344
CDS:K10G6.3k K10G6.3k 4950   II: 3962522-3962853
CDS:K10G6.3l K10G6.3l 4515   II: 3962522-3962853
CDS:K10G6.3o K10G6.3o 4944   II: 3962522-3962853
CDS:K10G6.3q K10G6.3q 4458   II: 3964340-3965280

0 Laboratories

1 Phenotype

Identifier Name Description
WBPhenotype:0000280 breaks in alae The small linear ridges running along the lateral lines of the cuticle, lengthwise along the body, contain gaps as opposed to a continuous arrangement (Wormatlas).

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00038300

0 Strain