WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00087495 Phenotype Remark  kvs-1 RNAi-treated animals exhibited impaired chemotaxis to lysine and to biotin, defective osmotic avoidance, and nose-touch responses.
Remark  cDNA was used as the template.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002242 kvs-1 C53C9.3 Caenorhabditis elegans

4 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C53C9.3a C53C9.3a 1473   X: 7690933-7690990
CDS:C53C9.3b C53C9.3b 1488   X: 7690933-7690990
CDS:C53C9.3c C53C9.3c 1434   X: 7691585-7691603
CDS:C53C9.3d C53C9.3d 1500   X: 7690933-7690990

1 Laboratories

Primary Identifier
FDX

4 Phenotype

Identifier Name Description
WBPhenotype:0000249 osmotic avoidance defective Failure to execute the characteristic avoidance response to solutions of high osmotic strength as defined by control animals.
WBPhenotype:0001221 nose touch defective Animal fails to exhibit characteristic response after a nose-on collision with an object compared to control. In C. elegans, this is usually assayed with a hair or similar fiber. The nose is the anterior most tip of the animal.
WBPhenotype:0001565 lysine chemotaxis defective Failure to execute characteristic response to lysine as defined by control animals. In C. elegans, lysine is an attractant.
WBPhenotype:0002016 biotin chemotaxis defective Failure to execute the characteristic response to biotin as defined by control animals. In C. elegans, biotin is typically an attractant.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00005801

0 Strain