WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00106785 Genotype  SQST-1::GFP
Phenotype Remark  lgg-2(RNAi) causes accumulation of SQST-1 protein aggregates in the embryo. Simultaneous depletion of lgg-2 and lgg-1 did not further increase the number of aggregates. Remark  Exact sequence used for RNAi not stated by authors, spliced coding region sequence of gene used for curation. Method for delivery of RNAi also not stated.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002981 lgg-2 ZK593.6 Caenorhabditis elegans

2 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK593.6a ZK593.6a 429   IV: 10934764-10934917
CDS:ZK593.6b ZK593.6b 225   IV: 10934764-10934917

0 Laboratories

1 Phenotype

Identifier Name Description
WBPhenotype:0001405 protein aggregation variant Variations that result in the accumulation of soluble/insoluble protein aggregates in a particular cell or tissue, compared to control. Protein aggregates are often formed by interactions between misfolded protein molecules and/or deficiencies in proper protein folding.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00049000

0 Strain