WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00078263 Phenotype Remark  Authors note this experiment confirmed a possible role for thn-2 in defense, but gave puzzling results; when N2 worms were treated, they exhibited a severe Dar (swollen tail) phenotype after infection, whereas rrf-3 worms (RNAi-hypersensitive) were Bus (un-swollen), possibly as a result of a threshold effect.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009215 thn-2 F28D1.5 Caenorhabditis elegans

1 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F28D1.5 F28D1.5 702   IV: 12383172-12383429

1 Laboratories

Primary Identifier
CB

1 Phenotype

Identifier Name Description
WBPhenotype:0000338 tail swelling Swelling in the post anal region compared to control. In C. elegans this swelling can be associated with infection from the nematode-specific bacterial pathogen, Microbacterium nematophilum.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00027722

1 Strain

WormBase ID
WBStrain00000001