WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00097024 Phenotype Remark  Age-associated oily droplets between the pharyngeal bulbs developed earlier in response to cst-1/2 RNAi knockdown when compared to N2 (wild type) nematodes
Remark  (Figure 6H) cst-1/cst-2 RNAi (dsRNA targets both genes)
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

2 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016038 cst-2 C24A8.4 Caenorhabditis elegans
WBGene00017472 cst-1 F14H12.4 Caenorhabditis elegans

3 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F14H12.4a F14H12.4a 1488   X: 4339644-4339693
CDS:C24A8.4 C24A8.4 1266   X: 4333192-4333346
CDS:F14H12.4b F14H12.4b 1494   X: 4339644-4339693

1 Laboratories

Primary Identifier
LD

1 Phenotype

Identifier Name Description
WBPhenotype:0001888 fat associated bodies increased Animals exhibit an increase in the number of fat containing organelles compared to control. In C. elegans this number can be assayed by increases in the number of BODIPY 493/503 staining.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00027662

1 Strain

WormBase ID
WBStrain00000001