WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00064389 Genotype  kbIs5[Pgpdh-1::GFP;rol-6(su1006)]
Remark  RNAi gave positive results in at least 4/5 trials.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004161 pqn-80 Y111B2A.14 Caenorhabditis elegans

14 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y111B2A.14a Y111B2A.14a 4251   III: 12626575-12626718
CDS:Y111B2A.14s Y111B2A.14s 2448   III: 12626575-12626718
CDS:Y111B2A.14b Y111B2A.14b 4341   III: 12626575-12626718
CDS:Y111B2A.14f Y111B2A.14f 3681   III: 12628947-12629306
CDS:Y111B2A.14g Y111B2A.14g 3762   III: 12628947-12629306
CDS:Y111B2A.14h Y111B2A.14h 3672   III: 12628947-12629306
CDS:Y111B2A.14k Y111B2A.14k 3192   III: 12630583-12630678
CDS:Y111B2A.14c Y111B2A.14c 4350   III: 12626575-12626718
CDS:Y111B2A.14d Y111B2A.14d 4260   III: 12626575-12626718
CDS:Y111B2A.14e Y111B2A.14e 3771   III: 12628947-12629306
CDS:Y111B2A.14i Y111B2A.14i 3201   III: 12630583-12630678
CDS:Y111B2A.14j Y111B2A.14j 3111   III: 12630583-12630678
CDS:Y111B2A.14l Y111B2A.14l 3102   III: 12630583-12630678
CDS:Y111B2A.14t Y111B2A.14t 2448   III: 12626575-12626718

1 Laboratories

Primary Identifier
VP

1 Phenotype

Identifier Name Description
WBPhenotype:0001236 transgene expression increased Any increase in the intensity of expression of a gene product produced by exogenous DNA that has been introduced into the organism compared to its expression in control animals.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00028383

0 Strain