WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00069418 Genotype  hs:LIN-3
Phenotype Remark  hs:LIN-3 induces a reversible cessation of pharyngeal pumping (behavioral quiescence) and let-23 RNAi partially suppresses the hs:LIN-3 pumping defect. Remark  hs:LIN-3 amimals have a transgene that induces LIN-3 expression via heat shock. hs:LIN-3 = lin-3 cDNA placed under the control of the hsp16-41 promoter.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002299 let-23 ZK1067.1 Caenorhabditis elegans

4 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK1067.1d ZK1067.1d 4008   II: 9197518-9197647
CDS:ZK1067.1a ZK1067.1a 3972   II: 9198346-9198460
CDS:ZK1067.1b ZK1067.1b 3789   II: 9199189-9199347
CDS:ZK1067.1c ZK1067.1c 3987   II: 9197518-9197647

1 Laboratories

Primary Identifier
PS

1 Phenotype

Identifier Name Description
WBPhenotype:0001524 quiescence variant Exhibition of quiescent behavior under inappropriate conditions and improper recovery from quiescent state. Quiescent behavior is normally coupled with lethargus.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00031030

0 Strain