WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00097130 Phenotype Remark  col-92 RNAi resulted in decreased survival of wild type worms exposed to pathogenic Bacillus thuringiensis strain DB27
Remark  (Figure 8D) col-92 RNAi

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

3 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000667 col-92 W05B2.6 Caenorhabditis elegans
WBGene00000668 col-93 W05B2.5 Caenorhabditis elegans
WBGene00000669 col-94 W05B2.1 Caenorhabditis elegans

3 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W05B2.6 W05B2.6 915   III: 10982200-10983033
CDS:W05B2.5 W05B2.5 915   III: 10984613-10985446
CDS:W05B2.1 W05B2.1 915   III: 10986867-10987700

1 Laboratories

Primary Identifier
RS

1 Phenotype

Identifier Name Description
WBPhenotype:0001013 pathogen susceptibility increased Animals are more prone to infection compared to control.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00044013

1 Strain

WormBase ID
WBStrain00000001