WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00086023 Genotype  rrf-1(pk1417); mpk-1(ga111)
Phenotype Remark  F54D12.5(RNAi) enhanced the disorganization of oocytes of mpk-1(ga111) animals.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018819 rog-1 F54D12.6 Caenorhabditis elegans

2 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F54D12.6a F54D12.6a 1800   II: 1369046-1369145
CDS:F54D12.6b F54D12.6b 1791   II: 1369046-1369145

1 Laboratories

Primary Identifier
OD

2 Phenotype

Identifier Name Description
WBPhenotype:0001951 pachytene region organization variant Animals exhibit variations from control animals in the organization of the germ cell nuclei in the pachytene stage region of the gonad. In C. elegans the pachytene region begins just proximal to the germline's transition zone, where germ cells coordinately switch into the leptotene/zygotene stage from the premeiosis stage (WormAtlas).
WBPhenotype:0001925 oocytes disorganized Oocytes are no longer arranged in the gonad in the same manner as control animals.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00038381

0 Strain