WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00101436 Genotype  rde-1(ne219)/+; syIs50 [cdh-3::GFP] (marker for the anchor cell)
Phenotype Remark  pop-1(RNAi) L3 animals can have multiple anchor cells with 62% of animals exhibiting 2 anchor cells and 24% exhibiting 3 anchor cells. Remark  (Figure 3F, Table 1) zygotic pop-1 RNAi (see treatment details). Authors report using genomic sequence of gene as template DNA for dsRNA sequence. Entire genomic sequence used for curation.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

2 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004077 pop-1 W10C8.2 Caenorhabditis elegans
WBGene00220126 W10C8.17 W10C8.17 Caenorhabditis elegans

1 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W10C8.2 W10C8.2 1317   I: 2823468-2823937

1 Laboratories

Primary Identifier
JK

1 Phenotype

Identifier Name Description
WBPhenotype:0001586 multiple anchor cells Animals contain more than one anchor cell. In C. elegans, presumptive ventral uterine cells undergo fate transformation and instead acquire the properties of an anchor cell (often due to defects in lateral signaling).

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00005116

0 Strain