WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00097007 Genotype  rrf-3(pk1426)
Remark  (Figure 3A) atm-1 RNAi. Exact sequence used for RNAi not stated by authors, spliced coding region sequence of gene used for curation.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000227 atm-1 Y48G1BL.2 Caenorhabditis elegans

2 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y48G1BL.2a Y48G1BL.2a 7137   I: 183376-183456
CDS:Y48G1BL.2b Y48G1BL.2b 5106   I: 192695-193095

1 Laboratories

Primary Identifier
DW

0 Phenotype

2 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0001403 antibody subcellular localization variant Any variation in the placement of a protein, as detected by antibody staining, within in a cell or cellular compartment compared to control.
WBPhenotype:0001878 hydroxyurea response variant Animals exhibit variations in the response to the addition of hydroxyurea compared to that observed in control animals. Hydroxyurea stops DNA from being replicated.

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00026962

0 Strain