WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00097070 Phenotype Remark  skn-1 RNAi resulted in reduced survival in the presence of pathogenic Enterococcus faecalis bacteria compared to controls
Remark  (Figure 6C, Table S2A) skn-1 RNAi
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004804 skn-1 T19E7.2 Caenorhabditis elegans

4 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T19E7.2a T19E7.2a 1872   IV: 5651764-5651840
CDS:T19E7.2d T19E7.2d 672   IV: 5651764-5651840
CDS:T19E7.2c T19E7.2c 1602   IV: 5651764-5651840
CDS:T19E7.2b T19E7.2b 933   IV: 5651764-5651840

1 Laboratories

Primary Identifier
GF

1 Phenotype

Identifier Name Description
WBPhenotype:0001013 pathogen susceptibility increased Animals are more prone to infection compared to control.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00040565

0 Strain