WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00066538 Genotype  rrf-3(pk1426)
Phenotype Remark  Nicotine sensitivity assays: A total of 30 young adult animals were transferred to NGM plates containing 0.425 or 0.5% (v/v) (-)-nicotine, or 1 or 0.2mM levamisole. Paralysis was followed by visual inspection every 15 minutes and defined as lack of movement in response to prodding.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010830 appg-1 M02G9.1 Caenorhabditis elegans

7 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M02G9.1a M02G9.1a 2730   II: 10326294-10326362
CDS:M02G9.1e M02G9.1e 2313   II: 10326294-10326362
CDS:M02G9.1d M02G9.1d 1902   II: 10326294-10326362
CDS:M02G9.1b M02G9.1b 4500   II: 10326294-10326362
CDS:M02G9.1c M02G9.1c 2136   II: 10326294-10326362
CDS:M02G9.1f M02G9.1f 4152   II: 10330071-10330085
CDS:M02G9.1g M02G9.1g 1788   II: 10330071-10330085

1 Laboratories

Primary Identifier
AQ

1 Phenotype

Identifier Name Description
WBPhenotype:0001202 nicotine hypersensitive Animals respond to nicotine at lower concentrations or shorter exposure compared to control. Nicotine is a cholinergic agonist.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00026635

0 Strain