WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00066544 Genotype  rrf-3(pk1426)
Phenotype Remark  Nicotine sensitivity assays: A total of 30 young adult animals were transferred to NGM plates containing 0.425 or 0.5% (v/v) (-)-nicotine, or 1 or 0.2mM levamisole. Paralysis was followed by visual inspection every 15 minutes and defined as lack of movement in response to prodding.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002203 kin-20 F46F2.2 Caenorhabditis elegans

7 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F46F2.2c F46F2.2c 1494   X: 15269657-15269726
CDS:F46F2.2e F46F2.2e 894   X: 15270733-15270748
CDS:F46F2.2d F46F2.2d 1443   X: 15271105-15271123
CDS:F46F2.2a F46F2.2a 1440   X: 15270733-15270748
CDS:F46F2.2b F46F2.2b 948   X: 15269657-15269726
CDS:F46F2.2f F46F2.2f 897   X: 15271105-15271123
CDS:F46F2.2g F46F2.2g 930   X: 15271105-15271123

1 Laboratories

Primary Identifier
AQ

1 Phenotype

Identifier Name Description
WBPhenotype:0001202 nicotine hypersensitive Animals respond to nicotine at lower concentrations or shorter exposure compared to control. Nicotine is a cholinergic agonist.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00026635

0 Strain