WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00090530 Genotype  ccIs55 [unc-54::lacZ]
Phenotype Remark  The proteasome inhibitor MG132 failed to suppress the RNAi-induced increase in muscle protein degradation, as determined by LacZ staining, suggesting that this increase in degradation is not dependent on the proteasome. Remark  (Figure 4) unc-77 RNAi

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006809 unc-77 C11D2.6 Caenorhabditis elegans

16 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C11D2.6c C11D2.6c 5406   IV: 6157443-6157553
CDS:C11D2.6e C11D2.6e 5397   IV: 6157443-6157553
CDS:C11D2.6b C11D2.6b 5304   IV: 6157443-6157553
CDS:C11D2.6d C11D2.6d 5586   IV: 6157443-6157553
CDS:C11D2.6j C11D2.6j 5361   IV: 6157443-6157553
CDS:C11D2.6k C11D2.6k 5448   IV: 6157443-6157553
CDS:C11D2.6l C11D2.6l 5463   IV: 6157443-6157553
CDS:C11D2.6n C11D2.6n 5415   IV: 6157443-6157553
CDS:C11D2.6o C11D2.6o 5502   IV: 6157443-6157553
CDS:C11D2.6p C11D2.6p 5517   IV: 6157443-6157553
CDS:C11D2.6a C11D2.6a 5484   IV: 6157443-6157553
CDS:C11D2.6f C11D2.6f 5217   IV: 6157443-6157553
CDS:C11D2.6g C11D2.6g 5499   IV: 6157443-6157553
CDS:C11D2.6h C11D2.6h 5319   IV: 6157443-6157553
CDS:C11D2.6i C11D2.6i 5550   IV: 6157443-6157553
CDS:C11D2.6m C11D2.6m 5604   IV: 6157443-6157553

1 Laboratories

Primary Identifier
CC

1 Phenotype

Identifier Name Description
WBPhenotype:0001645 protein degradation variant Variations in the chemical reactions and pathways resulting in the directed breakdown of a protein (via the destruction of its native, active configuration) compared to control.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00040284

0 Strain