WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00102967 Genotype  YFP-2xFYVE
Phenotype Remark  Authors found significantly reduced YFP-2xFYVE labeling of cell corpses in atg-18(RNAi) animals, suggesting that PtdIns3P generation and/or accumulation on phagosomes is affected (Figure 2A, B). Remark  (Figure 2A,B) atg-18 RNAi
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018294 atg-18 F41E6.13 Caenorhabditis elegans

2 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F41E6.13a F41E6.13a 1239   V: 8629724-8629788
CDS:F41E6.13b F41E6.13b 1185   V: 8629789-8629799

1 Laboratories

Primary Identifier
XW

1 Phenotype

Identifier Name Description
WBPhenotype:0002349 phosphatidylinositol 3-phosphate levels reduced The levels of phosphatidylinositol 3-phosphate (a.k.a. PtdIns3P or PI3P) are reduced compared to those of control animals

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00044390

0 Strain