WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00110851 Genotype  frIs7[Pnlp-29::GFP]
Phenotype Remark  RNAi resulted in a reduction in expression of the anitmicrobial peptide gene nlp-29 in worms after infection by Drechmeria coniospora, as indicated by reduced expression of a Pnlp-29::GFP transgene, compared to controls Remark  Table S5, sheet "final 297 clones", column "Is clone/overlaps clone"

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

6 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001877 his-3 T10C6.12 Caenorhabditis elegans
WBGene00001881 his-7 F45F2.4 Caenorhabditis elegans
WBGene00001893 his-19 K06C4.11 Caenorhabditis elegans
WBGene00001895 his-21 K06C4.3 Caenorhabditis elegans
WBGene00001925 his-51 F07B7.10 Caenorhabditis elegans
WBGene00001927 his-53 F07B7.3 Caenorhabditis elegans

6 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F45F2.4 F45F2.4 384   V: 8533379-8533762
CDS:F07B7.10 F07B7.10 384   V: 8849788-8850171
CDS:F07B7.3 F07B7.3 384   V: 8853670-8854053
CDS:K06C4.3 K06C4.3 384   V: 8891883-8892266
CDS:K06C4.11 K06C4.11 384   V: 8895765-8896148
CDS:T10C6.12 T10C6.12 384   V: 16040808-16041191

0 Laboratories

1 Phenotype

Identifier Name Description
WBPhenotype:0002460 no induction of antimicrobial peptide expression after infection Animals exhibit no induction of expression of an antimicrobial peptide after an infection, unlike control animals.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00049531

0 Strain