WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00108751 Genotype  atf-6(tm1153)
Phenotype Remark  "Knockdown of 10 of these 62 genes caused intestinal degeneration in both the ire-1(v33) and atf-6(tm1153) mutants (Table S2)." Remark  (Table S2) his-46 RNAi

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

5 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001905 his-31 F17E9.12 Caenorhabditis elegans
WBGene00001920 his-46 B0035.9 Caenorhabditis elegans
WBGene00001930 his-56 F54E12.3 Caenorhabditis elegans
WBGene00001934 his-60 F55G1.11 Caenorhabditis elegans
WBGene00001938 his-64 F22B3.1 Caenorhabditis elegans

5 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F55G1.11 F55G1.11 312   IV: 7487681-7487992
CDS:F22B3.1 F22B3.1 312   IV: 11407116-11407427
CDS:B0035.9 B0035.9 312   IV: 11326018-11326329
CDS:F17E9.12 F17E9.12 312   IV: 8333672-8333983
CDS:F54E12.3 F54E12.3 312   IV: 11338522-11338833

0 Laboratories

1 Phenotype

Identifier Name Description
WBPhenotype:0002428 intestinal degeneration Animals exhibit degeneration of the intestine, compared to control animals.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00041065

0 Strain