WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00110535 Genotype  rrf-3(pk1426); hlh-2(bx115) unc-13(e51); mgIs18 [ttx-3prom::gfp]
Phenotype Remark  Authors found that RNAi against hlh-16 affected the outgrowth of the axons of both AIY interneurons into the nerve ring such that they stop prematurely. AIYL was significantly more affected than AIYR. Remark  pk1426 globally sensitizing animals to the effects of RNAi and bx115 (a mutation in the bHLH cofactor hlh-2) sensitizing animals for the loss of function of other bHLH factors. Exact sequence used for RNAi not stated by authors, Ahringer laboratory clone used for curation. No methods of RNAi introduction to organism given.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001960 hlh-16 DY3.3 Caenorhabditis elegans

1 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:DY3.3 DY3.3 441   I: 8767027-8767134

0 Laboratories

1 Phenotype

Identifier Name Description
WBPhenotype:0001224 axon outgrowth variant Any variation in the processes that govern the extension of axons compared to control.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00039859

0 Strain