WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00102115 Genotype  baInl3; Punc-54::-syn::gfp, Punc-54::tor-2, rol-6 (su1006)
Phenotype Remark  RNAi knockdown of a C. elegans Ctsd ortholog (asp-4) worsens aggregation of human -syn in vivo.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000217 asp-4 R12H7.2 Caenorhabditis elegans

1 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R12H7.2 R12H7.2 1335   X: 13219075-13219225

0 Laboratories

1 Phenotype

Identifier Name Description
WBPhenotype:0001405 protein aggregation variant Variations that result in the accumulation of soluble/insoluble protein aggregates in a particular cell or tissue, compared to control. Protein aggregates are often formed by interactions between misfolded protein molecules and/or deficiencies in proper protein folding.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00032368

0 Strain