WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00117195 Genotype  baIn11[Pdat-1:: -syn (human, wildtype), Pdat-1::GFP]; baIn33 [Pdat-1::sid-1, Pmyo-2::mCherry]; sid-1(pk3321)
Phenotype Remark  enhanced a-syn-induced dopaminergic neurodegeneration (Figure 4) Remark  (Figure 4) kcnl-2 RNAi Ahringer clone

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008570 kcnl-2 F08A10.1 Caenorhabditis elegans

8 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F08A10.1j F08A10.1j 2568   I: 8174888-8175055
CDS:F08A10.1k F08A10.1k 2145   I: 8180998-8181031
CDS:F08A10.1d F08A10.1d 1887   I: 8196060-8196137
CDS:F08A10.1e F08A10.1e 2010   I: 8196060-8196137
CDS:F08A10.1a F08A10.1a 1908   I: 8196060-8196137
CDS:F08A10.1f F08A10.1f 2007   I: 8183359-8183380
CDS:F08A10.1h F08A10.1h 1908   I: 8190472-8190549
CDS:F08A10.1i F08A10.1i 1959   I: 8196060-8196137

0 Laboratories

1 Phenotype

Identifier Name Description
WBPhenotype:0002380 neuron degeneration enhanced Neurons undergo a dramatic decrease in cell volume, collapse of the vacuoles and processes, and complete disintegration of the plasma membrane and most organelles at a faster rate or greater extent than those under conditions that elicit this response in control animals.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00064375

1 Strain

WormBase ID
WBStrain00047168