WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00114909 Genotype  frIs7 [nlp-29p::GFP + col-12p::dsRed]
Phenotype Remark  "We also used a COPAS BIOSORT to quantify nlp-29p::GFP fluorescence with RNAi inactivation of 11 dpy genes (Figure 1B and Figure S1 in File S1), nine of which overlap with Figure 1A. These results confirmed strong activation of nlp-29p::GFP with dpy-2, 3, 7, and 10 and lack of strong activation with dpy-11, 13, 5, 1, and 20; they also added dpy-8 and 9 to the list of dpy clones activating nlp-29p::GFP. nlp-29p::GFP induction has also been confirmed in mutants of dpy-9 and 10 (Pujol et al. 2008b; Zugasti et al. 2014)." Remark  dpy-9 (WBGene00001071) RNAi

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001071 dpy-9 T21D12.2 Caenorhabditis elegans

2 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T21D12.2a T21D12.2a 948   IV: 257503-257664
CDS:T21D12.2b T21D12.2b 633   IV: 257503-257664

0 Laboratories

1 Phenotype

Identifier Name Description
WBPhenotype:0002539 antimicrobial gene expression increased Animals exhibit an increase in the expression of one or more known, endogenous, antimicrobial genes, compared to controls.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00053771

0 Strain