WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

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Gene :

WormBase Gene ID	WBGene00023864	Gene Name	Cbr-clpr-2
Sequence Name	CBG00485	Organism	Caenorhabditis briggsae
Automated Description	Predicted to enable calcium-dependent cysteine-type endopeptidase activity. Predicted to be involved in proteolysis. Is an ortholog of C. elegans clpr-2.	Biotype	SO:0001217
Genetic Position	:±

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External Links

No external links.

1 Organism

Name	Taxon Id
Caenorhabditis briggsae	6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
Transcript:CBG00485.1	CBG00485.1		[unknown]

Other

1 CDSs

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
CDS:CBG00485	CBG00485		[unknown]

0 RNAi Result

17 Allele

Public Name
WBVar00030304
WBVar00030299
WBVar00063003
WBVar00062973
WBVar00063008
WBVar00062978
WBVar00063013
WBVar00062983
WBVar00062953
WBVar00063018
WBVar00062988
WBVar00062958
WBVar00063023
WBVar00062993
WBVar00062963
WBVar00062998
WBVar00062968

0 Chromosome

0 Chromosome Location

2 Data Sets

Name	URL
WormBaseAcedbConverter
GO Annotation data set

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark	Reporter Gene	Primary Identifier	Pattern	Subcellular Localization
CBG00485, TGTATTATTGGATATGTCTGTCGGAAATCGAGTACTGTACCAAACTTTAGGCAGATTTGA, WBGene00023864		Expr1062129	Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012

2 GO Annotation

Annotation Extension	Qualifier
	enables
	involved_in

0 Homologues

0 Locations

2 Ontology Annotations

Annotation Extension	Qualifier
	enables
	involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier	Name	Description
	gene

0 Strains

0 Upstream Intergenic Region