WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00023890 Gene Name  Cbr-piga-1
Sequence Name  ? CBG00513 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable glycosyltransferase activity. Predicted to be involved in GPI anchor biosynthetic process. Is an ortholog of C. elegans piga-1. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG00513.1 CBG00513.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG00513 CBG00513   [unknown]

0 RNAi Result

14 Allele

Public Name
WBVar00036429
WBVar00141381
WBVar00008284
WBVar00008289
WBVar00063228
WBVar00063198
WBVar00063203
WBVar00063208
WBVar00063213
WBVar00063183
WBVar00063218
WBVar00063188
WBVar00063223
WBVar00063193

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG00513, AAATACAATCTCCACTCTCGTGTCGTGATGCTTGGAATGCTGCCTCATAATCAAGTGAAA, WBGene00023890   Expr1060218 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

2 GO Annotation

Annotation Extension Qualifier
  enables
  involved_in

0 Homologues

0 Locations

2 Ontology Annotations

Annotation Extension Qualifier
  enables
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region