WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00023962 Gene Name  Cbr-fli-1
Sequence Name  ? CBG00589 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable actin filament binding activity. Is an ortholog of C. elegans fli-1. Biotype  SO:0001217
Genetic Position 
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG00589a.1 CBG00589a.1   [unknown]
Transcript:CBG00589c.1 CBG00589c.1   [unknown]
Transcript:CBG00589b.1 CBG00589b.1   [unknown]
 

Other

3 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG00589a CBG00589a   [unknown]
CDS:CBG00589b CBG00589b   [unknown]
CDS:CBG00589c CBG00589c   [unknown]

0 RNAi Result

1 Allele

Public Name
WBVar00003309

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-fli-1, TTCATGTTGGCAGTAAGAGGACATGAAAGTTGTCGATTCAGAAAGTGTTTCCATGCTTGG, WBGene00023962   Expr1065733 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

1 GO Annotation

Annotation Extension Qualifier
  enables

0 Homologues

0 Locations

1 Ontology Annotations

Annotation Extension Qualifier
  enables

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region