WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00024072 Gene Name  Cbr-acr-14
Sequence Name  ? CBG00726 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable acetylcholine-gated monoatomic cation-selective channel activity and transmembrane signaling receptor activity. Predicted to be involved in monoatomic ion transmembrane transport. Predicted to be located in postsynaptic membrane. Is an ortholog of C. elegans acr-14. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG00726.1 CBG00726.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG00726 CBG00726   [unknown]

0 RNAi Result

13 Allele

Public Name
WBVar00141450
WBVar00141439
WBVar00141447
WBVar00141448
WBVar00141449
WBVar00141443
WBVar00141444
WBVar00141445
WBVar00141446
WBVar00141440
WBVar00141441
WBVar00141442
WBVar00042117

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

2 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-acr-14, GAGGTTCGCTGCAATGGCTGTGGATAGACTGTGTCTTTACGTGTTCTCTGCATTTATCAC, WBGene00024072   Expr1059555 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
CBG00729, GAGCAAATTCACTCTCGGCAAGAATCCAACAGTTTCCAGTACACCGCTGAACCGAAACCC, WBGene00024073   Expr1067760 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

8 GO Annotation

Annotation Extension Qualifier
  enables
  enables
  enables
  enables
  involved_in
  involved_in
  located_in
  located_in

0 Homologues

0 Locations

8 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables
  enables
  enables
  involved_in
  involved_in
  located_in
  located_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region