WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00024195 Gene Name  Cbr-mel-11
Sequence Name  ? CBG00870 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable protein kinase binding activity. Is an ortholog of C. elegans mel-11. In C. elegans, mel-11 is involved in embryo development and embryonic body morphogenesis. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG00870a.1 CBG00870a.1   [unknown]
Transcript:CBG00870b.1 CBG00870b.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG00870b CBG00870b   [unknown]
CDS:CBG00870a CBG00870a   [unknown]

0 RNAi Result

6 Allele

Public Name
WBVar00064893
WBVar00064878
WBVar00064898
WBVar00064883
WBVar00064903
WBVar00064888

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-mel-11, AATGGAAAATCAACGGTTGAAGGAGGAGAACGGAGCGCTGGTCAGGGTCATTTCGAAGAT, WBGene00024195   Expr1060808 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

1 GO Annotation

Annotation Extension Qualifier
  enables

0 Homologues

0 Locations

1 Ontology Annotations

Annotation Extension Qualifier
  enables

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region