WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

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Gene :

WormBase Gene ID  ? WBGene00024225 Gene Name  Cbr-let-23
Sequence Name  ? CBG00911 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable protein tyrosine kinase activity. Is an ortholog of C. elegans let-23. In C. elegans, let-23 is involved in several processes, including determination of adult lifespan; positive regulation of vulval development; and reproductive structure development. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG00911a.1 CBG00911a.1   [unknown]
Transcript:CBG00911b.1 CBG00911b.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG00911a CBG00911a   [unknown]
CDS:CBG00911b CBG00911b   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-let-23, CTACGTCAACCAGCCAATCAGCCAACCAGGATCATCCAACGGTTACTATAACCAGCCAAG, WBGene00024225   Expr1058512 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

3 GO Annotation

Annotation Extension Qualifier
  enables
  enables
  involved_in

0 Homologues

0 Locations

3 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region