WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00025129 Gene Name  CBG01970
Sequence Name  ? CBG01970 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable metal ion binding activity. Predicted to be involved in L-methionine salvage from methylthioadenosine. Predicted to be located in cytoplasm. Is an ortholog of C. elegans ZC373.5. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG01970.1 CBG01970.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG01970 CBG01970   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

2 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG01970, TTACGATATCTCACAAAAGACCGAGGTTCAACGACCAGCCAACAAGAGAATCGCCGTTTC, WBGene00025129   Expr1059025 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
CBG01968, GCCAATAAGAGGAGTCCTCGAGAATCATCCCCAAGCGATTGCAGTGCTTGTCAGAAATCA, WBGene00025127   Expr1054479 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

3 GO Annotation

Annotation Extension Qualifier
  enables
  involved_in
  located_in

0 Homologues

0 Locations

3 Ontology Annotations

Annotation Extension Qualifier
  enables
  involved_in
  located_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region