WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00025179 Gene Name  Cbr-kin-29
Sequence Name  ? CBG02036 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable ATP binding activity and protein kinase activity. Is an ortholog of C. elegans kin-29. In C. elegans, kin-29 is involved in several processes, including dauer entry; positive regulation of growth rate; and transforming growth factor beta receptor signaling pathway. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG02036.1 CBG02036.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG02036 CBG02036   [unknown]

0 RNAi Result

16 Allele

Public Name
WBVar00070336
WBVar00054244
WBVar00054239
WBVar00022299
WBVar00022269
WBVar00022304
WBVar00022274
WBVar00022309
WBVar00022279
WBVar00022249
WBVar00022284
WBVar00022254
WBVar00022289
WBVar00022259
WBVar00022294
WBVar00022264

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-kin-29, GATCGGAGTTGCCGTATTACCTCCAGAGCATAAATCTCACGTGGAATTCGCAATCATCAA, WBGene00025179   Expr1054266 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

3 GO Annotation

Annotation Extension Qualifier
  enables
  enables
  involved_in

0 Homologues

0 Locations

3 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region