WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00025415 Gene Name  Cbr-crh-2
Sequence Name  ? CBG02346 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable DNA-binding transcription factor activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans crh-2. In C. elegans, crh-2 is involved in defense response to Gram-negative bacterium; positive regulation of dauer entry; and regulation of gene expression. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG02346a.1 CBG02346a.1   [unknown]
Transcript:CBG02346b.1 CBG02346b.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG02346b CBG02346b   [unknown]
CDS:CBG02346a CBG02346a   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

2 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG02346, AGAGTACATTGATGCCCTCGAAAGTCGTTTGCACTGTTTCAGTGAAGAAAACAAGGCTCT, WBGene00025415   Expr1059571 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
CBG02347, ACACAACGGGACCACTCGAAAAGGACATATTCATTTCAGAGATTCACAACACCGACAGAG, WBGene00025416   Expr1062502 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

2 GO Annotation

Annotation Extension Qualifier
  enables
  involved_in

0 Homologues

0 Locations

2 Ontology Annotations

Annotation Extension Qualifier
  enables
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region