WormMine: Gene WBGene00025466

• WormBase Gene ID: WBGene00025466
• Gene Name: Cbr-mrps-16
• Sequence Name: CBG02407
• Organism: Caenorhabditis briggsae
• Automated Description: Predicted to be a structural constituent of ribosome. Predicted to be involved in translation. Predicted to be located in ribosome. Is an ortholog of C. elegans mrps-16.
• Biotype: SO:0001217
• Genetic Position: :±

1 Organism

• Name: Caenorhabditis briggsae
• Taxon Id: 6238

0 Synonyms

Genomics

2 Transcripts

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
Transcript:CBG02407.1	CBG02407.1		[unknown]
Transcript:CBG02407.2	CBG02407.2		[unknown]

Other

1 CDSs

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
CDS:CBG02407	CBG02407		[unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

• WormBaseAcedbConverter
• GO Annotation data set

0 Downstream Intergenic Region

1 Expression Clusters

Regulated By Treatment	Description	Algorithm	Primary Identifier
	Transcripts that showed significantly decreased expression in Cbr-spr-4(gu163) comparing to in AF16.	DESeq2, FDR < 0.05.	WBPaper00059178:Cbr-spr-4(gu163)_downregulated

2 Expression Patterns

• Primary Identifier: Expr1063397
• Remark: CBG02408, ATATGCAATCGCCAGATTTGAAATTTCCCCAGAAGTTCCAGCTAATCTCGCAATCCTTCG, WBGene00025467
• Pattern: Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012

• Primary Identifier: Expr1060257
• Remark: CBG02407, TCCCAAATCTTTTATTCGAGCGAAGGACAACCGAGCGCTAATCGCTGATCAACAGTTGAA, WBGene00025466
• Pattern: Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012

3 GO Annotation

0 Homologues

0 Locations

3 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

• Name: gene

0 Strains

0 Upstream Intergenic Region