WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00025526 Gene Name  Cbr-eif-2D
Sequence Name  ? CBG02479 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable RNA binding activity and translation initiation factor activity. Predicted to be involved in formation of translation preinitiation complex. Is an ortholog of C. elegans eif-2D. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG02479.1 CBG02479.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG02479 CBG02479   [unknown]

0 RNAi Result

2 Allele

Public Name
WBVar00135978
WBVar00135979

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG02479, CTGTGTTCCTGATGGTCGAAAGCTTGACATGAAGAAAACTCGTTTCAAGAAGTTTGCCAC, WBGene00025526   Expr1058433 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

4 GO Annotation

Annotation Extension Qualifier
  enables
  enables
  involved_in
  involved_in

0 Homologues

0 Locations

4 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables
  involved_in
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region